Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-oxoprolinase subunit pxpa | DL545_RS17545 | Not Available | Negative | 3371777 - 3372511 | 25880.0 |
| 5-oxoprolinase subunit pxpc | DL545_RS17550 | Not Available | Negative | 3372501 - 3373433 | 34444.5 |
| 5-oxoprolinase subunit pxpb | DL545_RS17555 | Not Available | Negative | 3373427 - 3374083 | 23952.0 |
| radiation resistance protein ybgi | DL545_RS17560 | Not Available | Negative | 3374106 - 3374849 | 26894.0 |
| dipeptide permease dtpd | DL545_RS17565 | Not Available | Positive | 3375120 - 3376601 | 54177.1 |
| deoxyribodipyrimidine photo-lyase | DL545_RS17570 | Not Available | Negative | 3376643 - 3378061 | 53697.9 |
| ybga family protein | DL545_RS17575 | Not Available | Negative | 3378058 - 3378567 | 20212.4 |
| arylsulfatase | DL545_RS17585 | Not Available | Negative | 3378994 - 3380130 | 42872.7 |
| arylsulfatase | DL545_RS17590 | Not Available | Negative | 3380274 - 3380510 | 9027.83 |
| protein ybfc | DL545_RS17595 | Not Available | Negative | 3380736 - 3381305 | 21962.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





