Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase ding | DL545_RS16805 | Not Available | Negative | 3256623 - 3258773 | 81444.9 |
| n-glycosidase ybia | DL545_RS16815 | Not Available | Positive | 3258893 - 3259375 | 18647.3 |
| atp-dependent rna helicase rhle | DL545_RS16820 | Not Available | Negative | 3259607 - 3260971 | 49992.4 |
| dna-binding transcriptional regulator cecr | DL545_RS16825 | Not Available | Positive | 3261200 - 3261871 | 25002.1 |
| secretion protein hlyd | DL545_RS16830 | Not Available | Positive | 3261874 - 3262869 | 36268.7 |
| atp-binding cassette domain-containing protein | DL545_RS16835 | Not Available | Positive | 3262862 - 3264598 | 63149.3 |
| abc transporter permease | DL545_RS16840 | Not Available | Positive | 3264591 - 3265724 | 42062.4 |
| abc transporter permease | DL545_RS16845 | Not Available | Positive | 3265735 - 3266841 | 41568.2 |
| ybhq family protein | DL545_RS16850 | Not Available | Negative | 3266803 - 3267213 | 15425.6 |
| endonuclease/exonuclease/phosphatase family protein | DL545_RS16855 | Not Available | Positive | 3267346 - 3268107 | 28791.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





