Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive channel protein | DL545_RS16760 | Not Available | Positive | 3246363 - 3248588 | 81908.5 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | DL545_RS16765 | Not Available | Negative | 3248585 - 3249511 | 34227.8 |
| duf1471 family periplasmic protein mcba | DL545_RS26960 | Not Available | Positive | 3249787 - 3250047 | 8896.65 |
| catecholate siderophore receptor fiu | DL545_RS16775 | Not Available | Positive | 3250312 - 3252594 | 81964.5 |
| pkhd-type hydroxylase ybix | DL545_RS16780 | Not Available | Positive | 3252636 - 3253313 | 25530.2 |
| c4-type zinc finger protein ybii | DL545_RS16785 | Not Available | Positive | 3253387 - 3253653 | 9756.33 |
| duf1471 family protein ybij | DL545_RS16790 | Not Available | Positive | 3253918 - 3254178 | 8568.2 |
| protein ybie | DL545_RS27385 | Not Available | Negative | 3254281 - 3254340 | 2006.37 |
| hydroxycarboxylate dehydrogenase hcxb | DL545_RS16795 | Not Available | Negative | 3254407 - 3255492 | 38899.3 |
| dna-binding protein ybib | DL545_RS16800 | Not Available | Negative | 3255633 - 3256595 | 35050.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





