Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | DL545_RS00755 | Not Available | Negative | 146105 - 148135 | 75771.5 |
| protein bax | DL545_RS00760 | Not Available | Positive | 148455 - 149279 | 30869.3 |
| d-xylose utilization transcriptional activator xylr | DL545_RS00765 | Not Available | Negative | 149387 - 150565 | 44871.7 |
| xylose abc transporter permease xylh | DL545_RS00770 | Not Available | Negative | 150643 - 151824 | 41033.5 |
| d-xylose abc transporter atp-binding protein | DL545_RS00775 | Not Available | Negative | 151802 - 153343 | 56459.9 |
| d-xylose abc transporter substrate-binding protein | DL545_RS00780 | Not Available | Negative | 153421 - 154413 | 35722.1 |
| xylose isomerase | DL545_RS00785 | Not Available | Positive | 154779 - 156101 | 49735.7 |
| xylulokinase | DL545_RS00790 | Not Available | Positive | 156173 - 157627 | 52719.5 |
| inner membrane protein yiab | DL545_RS00795 | Not Available | Positive | 157796 - 158137 | 12553.0 |
| inner membrane protein yiaa | DL545_RS00800 | Not Available | Positive | 158183 - 158620 | 16123.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





