Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crosslink repair dna glycosylase ycaq | DL545_RS16195 | Not Available | Negative | 3121133 - 3122365 | 47670.6 |
| tetraacyldisaccharide 4'-kinase | DL545_RS16200 | Not Available | Negative | 3122402 - 3123388 | 35565.3 |
| lipid a abc transporter atp-binding protein/permease msba | DL545_RS16205 | Not Available | Negative | 3123385 - 3125133 | 64464.6 |
| comec family protein | DL545_RS16210 | Not Available | Negative | 3125170 - 3127434 | 84619.1 |
| integration host factor subunit beta | DL545_RS16215 | Not Available | Negative | 3127641 - 3127925 | 10651.8 |
| 30s ribosomal protein s1 | DL545_RS16220 | Not Available | Negative | 3128085 - 3129758 | 61161.5 |
| (d)cmp kinase | DL545_RS16225 | Not Available | Negative | 3129869 - 3130552 | 24747.8 |
| metallopeptidase ycal | DL545_RS16230 | Not Available | Negative | 3130725 - 3131489 | 26768.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DL545_RS16235 | Not Available | Negative | 3131658 - 3132941 | 46098.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | DL545_RS16240 | Not Available | Negative | 3133012 - 3134100 | 39900.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





