Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycbk family protein | DL545_RS16140 | Not Available | Negative | 3108131 - 3108679 | 20355.6 |
| l,d-transpeptidase | DL545_RS16150 | Not Available | Negative | 3108860 - 3110707 | 67824.4 |
| chromosome partition protein mukb | DL545_RS16155 | Not Available | Negative | 3110968 - 3115428 | 170227.0 |
| chromosome partition protein muke | DL545_RS16160 | Not Available | Negative | 3115428 - 3116132 | 26976.1 |
| chromosome partition protein mukf | DL545_RS16165 | Not Available | Negative | 3116113 - 3117435 | 50581.7 |
| trna uridine 5-oxyacetic acid(34) methyltransferase cmom | DL545_RS16170 | Not Available | Negative | 3117432 - 3118217 | 29796.9 |
| envelope biogenesis factor elyc | DL545_RS16175 | Not Available | Positive | 3118353 - 3119132 | 28678.0 |
| ycbj family phosphotransferase | DL545_RS16180 | Not Available | Negative | 3119109 - 3120002 | 34489.6 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | DL545_RS16185 | Not Available | Negative | 3120156 - 3120902 | 27618.1 |
| protein ycar | DL545_RS16190 | Not Available | Negative | 3120899 - 3121081 | 6855.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





