Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat shock protein hspq | DL545_RS15925 | Not Available | Positive | 3062855 - 3063172 | 11779.9 |
| coa-binding protein | DL545_RS15930 | Not Available | Negative | 3063217 - 3063630 | 14702.0 |
| duf2057 family protein | DL545_RS15935 | Not Available | Positive | 3063803 - 3064465 | 24595.5 |
| methylglyoxal synthase | DL545_RS15940 | Not Available | Positive | 3064561 - 3065019 | 16919.6 |
| dna helicase iv | DL545_RS15945 | Not Available | Negative | 3065051 - 3067105 | 77966.5 |
| yccf domain-containing protein | DL545_RS15950 | Not Available | Positive | 3067228 - 3067674 | 16276.3 |
| yccs family putative transporter | DL545_RS15955 | Not Available | Positive | 3067684 - 3069846 | 82022.8 |
| crp-s regulon transcriptional coactivator sxy | DL545_RS15960 | Not Available | Negative | 3069809 - 3070438 | 24148.3 |
| sos-induced cell division inhibitor sula | DL545_RS15965 | Not Available | Positive | 3070657 - 3071166 | 18802.5 |
| porin ompa | DL545_RS15975 | Not Available | Positive | 3071523 - 3072575 | 37480.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





