Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase-1 operon protein hyae | DL545_RS15875 | Not Available | Negative | 3054824 - 3055222 | 14871.5 |
| hydrogenase 1 maturation protease | DL545_RS15880 | Not Available | Negative | 3055219 - 3055806 | 21547.7 |
| ni/fe-hydrogenase b-type cytochrome subunit | DL545_RS15885 | Not Available | Negative | 3055803 - 3056510 | 27598.8 |
| ni/fe-hydrogenase large subunit | DL545_RS15890 | Not Available | Negative | 3056529 - 3058322 | 66257.0 |
| hydrogenase 1 small subunit | DL545_RS15895 | Not Available | Negative | 3058319 - 3059437 | 40696.6 |
| Trna-ser | Not Available | Not Available | Positive | 3059864 - 3059951 | Not Available |
| ftsh protease modulator ycca | DL545_RS15905 | Not Available | Positive | 3060158 - 3060817 | 23364.3 |
| sulfurtransferase tuse | DL545_RS15910 | Not Available | Positive | 3060908 - 3061237 | 12411.0 |
| acylphosphatase | DL545_RS15915 | Not Available | Negative | 3061234 - 3061512 | 10270.3 |
| 23s rrna (cytosine(1962)-c(5))-methyltransferase rlmi | DL545_RS15920 | Not Available | Positive | 3061607 - 3062797 | 44359.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





