Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tmao reductase system periplasmic protein tort | DL545_RS15775 | Not Available | Negative | 3035059 - 3036087 | 37866.9 |
| tmao reductase system sensor histidine kinase/response regulator tors | DL545_RS15780 | Not Available | Positive | 3036170 - 3038914 | 101017.0 |
| 4fe-4s binding protein | DL545_RS15785 | Not Available | Positive | 3038986 - 3040059 | 40129.3 |
| gnsa/gnsb family addiction module toxin | DL545_RS15790 | Not Available | Negative | 3040108 - 3040281 | 6575.99 |
| protein ymce | DL545_RS15795 | Not Available | Negative | 3040271 - 3040501 | 8687.53 |
| cold-shock protein | DL545_RS15800 | Not Available | Negative | 3040476 - 3040664 | 7104.55 |
| cold shock protein cspg | DL545_RS15805 | Not Available | Negative | 3040675 - 3040887 | 7781.14 |
| cold shock-like protein csph | DL545_RS15810 | Not Available | Positive | 3041173 - 3041385 | 7720.48 |
| threonine-rich inner membrane protein gfca | DL545_RS15815 | Not Available | Positive | 3041827 - 3042132 | 9447.98 |
| lipoprotein gfcb | DL545_RS15820 | Not Available | Positive | 3042239 - 3042883 | 24268.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





