Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase | DL545_RS14620 | Not Available | Positive | 2822546 - 2822827 | 10597.4 |
| lambda exonuclease family protein | DL545_RS14625 | Not Available | Positive | 2822824 - 2823504 | 25875.9 |
| duf1317 family protein | DL545_RS14630 | Not Available | Positive | 2823501 - 2823659 | 5974.29 |
| dgqhr domain-containing protein | DL545_RS14635 | Not Available | Positive | 2823656 - 2824720 | 39495.2 |
| trar/dksa family transcriptional regulator | DL545_RS14640 | Not Available | Positive | 2824874 - 2825092 | 8188.76 |
| duf4222 domain-containing protein | DL545_RS14645 | Not Available | Positive | 2825140 - 2825379 | 9477.5 |
| excisionase | DL545_RS14650 | Not Available | Positive | 2825519 - 2825755 | 8845.89 |
| site-specific integrase | DL545_RS14655 | Not Available | Positive | 2825745 - 2826887 | 43902.8 |
| nadp-dependent isocitrate dehydrogenase | DL545_RS14660 | Not Available | Negative | 2827001 - 2828251 | 45772.4 |
| 23s rrna pseudouridine(2457) synthase rlue | DL545_RS14665 | Not Available | Positive | 2828423 - 2829076 | 24881.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





