Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate transporter nark | DL545_RS14170 | Not Available | Negative | 2748152 - 2749543 | 49696.3 |
| nitrate/nitrite two-component system sensor histidine kinase narx | DL545_RS14180 | Not Available | Positive | 2749882 - 2751678 | 67088.0 |
| two-component system response regulator narl | DL545_RS14185 | Not Available | Positive | 2751671 - 2752321 | 23928.3 |
| inverse autotransporter invasin ycho | DL545_RS14190 | Not Available | Negative | 2752322 - 2753716 | 52117.7 |
| dsre/f sulfur relay family protein ychn | DL545_RS14195 | Not Available | Positive | 2753901 - 2754254 | 12693.5 |
| glutathione-specific gamma-glutamylcyclotransferase | DL545_RS14200 | Not Available | Negative | 2754298 - 2754993 | 25476.7 |
| putative cation transport regulator chab | DL545_RS14205 | Not Available | Negative | 2755151 - 2755381 | 8931.15 |
| sodium-potassium/proton antiporter chaa | DL545_RS14210 | Not Available | Positive | 2755651 - 2756751 | 39166.9 |
| type i toxin-antitoxin system toxin ldr family protein | DL545_RS14215 | Not Available | Positive | 2757156 - 2757263 | 3971.95 |
| type i toxin-antitoxin system toxin ldr family protein | DL545_RS14225 | Not Available | Positive | 2757692 - 2757799 | 3930.95 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





