Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease sohb | DL545_RS13925 | Not Available | Negative | 2701832 - 2702881 | 39368.7 |
| ycik family oxidoreductase | DL545_RS13930 | Not Available | Positive | 2703101 - 2703859 | 27947.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DL545_RS13935 | Not Available | Positive | 2703856 - 2704446 | 22014.2 |
| 23s rrna pseudouridine(2605) synthase rlub | DL545_RS13940 | Not Available | Negative | 2704486 - 2705358 | 32599.3 |
| l-threonylcarbamoyladenylate synthase | DL545_RS13945 | Not Available | Negative | 2705459 - 2706079 | 23213.2 |
| rnase rnm | DL545_RS13950 | Not Available | Negative | 2706076 - 2706957 | 32581.8 |
| trp operon leader peptide | DL545_RS13955 | Not Available | Positive | 2707095 - 2707139 | 1723.19 |
| anthranilate synthase component i | DL545_RS13960 | Not Available | Positive | 2707230 - 2708792 | 57594.9 |
| bifunctional anthranilate synthase glutamate amidotransferase component trpg/anthranilate phosphoribosyltransferase trpd | DL545_RS13965 | Not Available | Positive | 2708792 - 2710387 | 56873.4 |
| bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpf | DL545_RS13970 | Not Available | Positive | 2710388 - 2711749 | 49477.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





