Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exoribonuclease ii | DL545_RS13820 | Not Available | Positive | 2683303 - 2685237 | 72524.8 |
| hypothetical protein | DL545_RS13825 | Not Available | Negative | 2685315 - 2685419 | 4122.21 |
| cyclic di-gmp phosphodiesterase | DL545_RS13830 | Not Available | Positive | 2685473 - 2687458 | 74656.2 |
| protein ymid | DL545_RS27370 | Not Available | Negative | 2687440 - 2687568 | 4937.05 |
| protein yciz | DL545_RS13835 | Not Available | Positive | 2687605 - 2687778 | 6441.71 |
| dna-binding transcriptional regulator ycit | DL545_RS13840 | Not Available | Positive | 2687868 - 2688617 | 27590.2 |
| osmotically-inducible lipoprotein osmb | DL545_RS13845 | Not Available | Positive | 2688886 - 2689104 | 6948.51 |
| stress response translation initiation inhibitor ycih | DL545_RS13850 | Not Available | Negative | 2689230 - 2689556 | 11396.9 |
| orotidine-5'-phosphate decarboxylase | DL545_RS13855 | Not Available | Negative | 2689556 - 2690293 | 26367.8 |
| lipopolysaccharide assembly protein lapb | DL545_RS13860 | Not Available | Negative | 2690486 - 2691655 | 44533.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





