Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putrescine/proton symporter puup | DL545_RS13765 | Not Available | Positive | 2673027 - 2674412 | 50869.9 |
| ymja family protein | DL545_RS13770 | Not Available | Positive | 2674546 - 2674791 | 9321.8 |
| abc transporter substrate-binding protein sapa | DL545_RS13780 | Not Available | Positive | 2675104 - 2676747 | 61569.1 |
| putrescine export abc transporter permease sapb | DL545_RS13785 | Not Available | Positive | 2676744 - 2677709 | 36040.2 |
| peptide abc transporter permease sapc | DL545_RS13790 | Not Available | Positive | 2677696 - 2678586 | 31550.0 |
| peptide abc transporter atp-binding protein sapd | DL545_RS13795 | Not Available | Positive | 2678586 - 2679578 | 37662.9 |
| peptide abc transporter atp-binding protein sapf | DL545_RS13800 | Not Available | Positive | 2679580 - 2680386 | 30571.5 |
| duf559 domain-containing protein | DL545_RS13805 | Not Available | Positive | 2680454 - 2680807 | 13994.7 |
| enoyl-acp reductase fabi | DL545_RS13810 | Not Available | Positive | 2681175 - 2681963 | 27865.5 |
| carboxymuconolactone decarboxylase family protein | DL545_RS13815 | Not Available | Positive | 2682108 - 2683235 | 42203.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





