Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydbl family protein | DL545_RS13475 | Not Available | Negative | 2610381 - 2610710 | 12039.7 |
| ynbe family lipoprotein | DL545_RS13480 | Not Available | Negative | 2610715 - 2610900 | 6826.49 |
| ydbh family protein | DL545_RS13485 | Not Available | Negative | 2610897 - 2613536 | 96832.1 |
| d-lactate dehydrogenase | DL545_RS13490 | Not Available | Positive | 2613744 - 2614733 | 36522.8 |
| heat shock protein hslj | DL545_RS13495 | Not Available | Positive | 2614844 - 2615266 | 15166.5 |
| duf333 domain-containing protein | DL545_RS13500 | Not Available | Negative | 2615263 - 2615529 | 8696.44 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | DL545_RS13505 | Not Available | Positive | 2615803 - 2619327 | 128798.0 |
| porin ompn | DL545_RS13510 | Not Available | Positive | 2619695 - 2620828 | 41207.9 |
| universal stress protein uspf | DL545_RS13515 | Not Available | Positive | 2620969 - 2621403 | 15977.4 |
| trna 2-thiocytidine(32) synthetase ttca | DL545_RS13520 | Not Available | Positive | 2621579 - 2622514 | 35461.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





