Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs element core protein | DL545_RS13105 | Not Available | Negative | 2531167 - 2535387 | 157840.0 |
| type vi secretion system tip protein vgrg | DL545_RS13110 | Not Available | Negative | 2535455 - 2537563 | 78741.8 |
| ynch family protein | DL545_RS13115 | Not Available | Negative | 2538384 - 2538596 | 8259.59 |
| glutathione s-transferase family protein | DL545_RS13120 | Not Available | Negative | 2538672 - 2539289 | 23385.1 |
| l-asparagine permease | DL545_RS13125 | Not Available | Positive | 2539556 - 2541055 | 54250.3 |
| ynce family protein | DL545_RS13130 | Not Available | Negative | 2541170 - 2542231 | 38658.2 |
| tonb-dependent receptor pqqu | DL545_RS13140 | Not Available | Positive | 2542473 - 2544575 | 77250.9 |
| colanic acid/biofilm transcriptional regulator mcbr | DL545_RS13145 | Not Available | Negative | 2544611 - 2545276 | 25153.0 |
| nadph-dependent curcumin/dihydrocurcumin reductase | DL545_RS13150 | Not Available | Negative | 2545474 - 2546511 | 37600.0 |
| gnat family n-acetyltransferase | DL545_RS13160 | Not Available | Positive | 2546692 - 2547210 | 19258.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





