Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein | DL545_RS11800 | Not Available | Negative | 2268022 - 2268786 | 27442.9 |
| arac family transcriptional regulator | DL545_RS11810 | Not Available | Positive | 2269102 - 2270013 | 34896.2 |
| acyl-coa dehydrogenase | DL545_RS11815 | Not Available | Negative | 2270056 - 2271207 | 43004.6 |
| acyl coa:acetate/3-ketoacid coa transferase | DL545_RS11820 | Not Available | Negative | 2271221 - 2272816 | 57530.6 |
| type i 3-dehydroquinate dehydratase | DL545_RS11825 | Not Available | Negative | 2272961 - 2273719 | 27521.3 |
| quinate/shikimate dehydrogenase | DL545_RS11830 | Not Available | Negative | 2273750 - 2274616 | 31229.6 |
| mfs transporter | DL545_RS11835 | Not Available | Negative | 2274628 - 2275893 | 46036.9 |
| mfs transporter | DL545_RS11840 | Not Available | Negative | 2276120 - 2277334 | 44573.7 |
| ydil family protein | DL545_RS11845 | Not Available | Negative | 2277434 - 2277790 | 13929.7 |
| Ncrna_class:antisense_rna | Not Available | Not Available | Positive | 2277926 - 2278033 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





