Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yoak family small membrane protein | DL545_RS11325 | Not Available | Negative | 2178772 - 2178870 | 3458.45 |
| diguanylate cyclase dgcp | DL545_RS11330 | Not Available | Negative | 2178903 - 2179928 | 38521.8 |
| duf333 domain-containing lipoprotein yoaf | DL545_RS11335 | Not Available | Positive | 2180111 - 2180365 | 8942.87 |
| duf488 domain-containing protein | DL545_RS11340 | Not Available | Negative | 2180387 - 2180734 | 13354.9 |
| 2-nitroimidazole transporter | DL545_RS11345 | Not Available | Negative | 2180789 - 2181970 | 41245.8 |
| dna-binding transcriptional regulator nimr | DL545_RS11350 | Not Available | Positive | 2182067 - 2182888 | 30453.2 |
| duf441 domain-containing protein | DL545_RS11355 | Not Available | Negative | 2182845 - 2183291 | 15256.6 |
| small membrane protein yoai | DL545_RS11360 | Not Available | Positive | 2183460 - 2183564 | 3771.77 |
| mischarged aminoacyl-trna deacylase | DL545_RS11365 | Not Available | Negative | 2183565 - 2184068 | 17894.8 |
| diguanylate cyclase dgcj | DL545_RS11370 | Not Available | Negative | 2184111 - 2185601 | 56590.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





