Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copc domain-containing protein yoba | DL545_RS11060 | Not Available | Positive | 2132450 - 2132824 | 13453.0 |
| copper homeostasis membrane protein copd | DL545_RS11065 | Not Available | Positive | 2132828 - 2133700 | 32528.3 |
| yeby family protein | DL545_RS11070 | Not Available | Positive | 2133713 - 2134054 | 12423.2 |
| protein-serine/threonine phosphatase | DL545_RS11075 | Not Available | Positive | 2134450 - 2135106 | 25275.3 |
| yebw family protein | DL545_RS11080 | Not Available | Negative | 2135107 - 2135298 | 7324.62 |
| yebv family protein | DL545_RS11085 | Not Available | Negative | 2135403 - 2135639 | 8753.26 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | DL545_RS11090 | Not Available | Negative | 2135757 - 2137196 | 53272.4 |
| lipid-binding membrane homeostasis protein yebt | DL545_RS11095 | Not Available | Negative | 2137276 - 2139909 | 94931.0 |
| membrane integrity lipid transport subunit yebs | DL545_RS11100 | Not Available | Negative | 2139878 - 2141161 | 48276.3 |
| l-methionine (r)-s-oxide reductase | DL545_RS11105 | Not Available | Positive | 2141291 - 2141788 | 18066.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





