Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yersiniabactin biosynthesis oxidoreductase ybtu | DL545_RS10260 | Not Available | Negative | 1974447 - 1975547 | 40887.1 |
| yersiniabactin polyketide synthase hmwp1 | DL545_RS10265 | Not Available | Negative | 1975544 - 1985035 | 348858.0 |
| yersiniabactin non-ribosomal peptide synthetase hmwp2 | DL545_RS10270 | Not Available | Negative | 1985123 - 1991230 | 228675.0 |
| yersiniabactin transcriptional regulator ybta | DL545_RS10275 | Not Available | Negative | 1991421 - 1992380 | 35865.1 |
| yersiniabactin abc transporter atp-binding/permease protein ybtp | DL545_RS10280 | Not Available | Positive | 1992637 - 1994349 | 62874.7 |
| yersiniabactin abc transporter atp-binding/permease protein ybtq | DL545_RS10285 | Not Available | Positive | 1994336 - 1996138 | 66465.4 |
| yersiniabactin-associated zinc mfs transporter ybtx | DL545_RS10290 | Not Available | Positive | 1996131 - 1997411 | 44923.7 |
| yersiniabactin biosynthesis salicylate synthase irp9/ybts | DL545_RS10295 | Not Available | Positive | 1997439 - 1998743 | 48004.5 |
| tyrosine-type recombinase/integrase | DL545_RS10300 | Not Available | Negative | 1998937 - 2000199 | 48113.6 |
| Trna-asn | Not Available | Not Available | Positive | 2000361 - 2000436 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





