Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | DL545_RS09375 | Not Available | Negative | 1787973 - 1788551 | 21445.9 |
| yip1 family protein | DL545_RS09380 | Not Available | Positive | 1788721 - 1789308 | 21720.1 |
| d-alanyl-d-alanine endopeptidase | DL545_RS09385 | Not Available | Positive | 1789482 - 1790414 | 33889.4 |
| d-lactate dehydrogenase | DL545_RS09390 | Not Available | Negative | 1790452 - 1792167 | 64680.0 |
| beta-glucosidase bglx | DL545_RS09395 | Not Available | Positive | 1792363 - 1794660 | 83566.8 |
| glycine betaine abc transporter substrate-binding protein osmf | DL545_RS09400 | Not Available | Positive | 1794871 - 1795788 | 32553.0 |
| glycine betaine abc transporter permease yehy | DL545_RS09405 | Not Available | Positive | 1795795 - 1796952 | 41234.3 |
| glycine betaine abc transporter atp binding protein yehx | DL545_RS09410 | Not Available | Positive | 1796945 - 1797871 | 34380.6 |
| glycine betaine abc transporter permease yehw | DL545_RS09415 | Not Available | Positive | 1797876 - 1798607 | 25530.1 |
| protein yoho | DL545_RS09420 | Not Available | Negative | 1798588 - 1798695 | 3642.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





