Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c maturation protein ccme | DL545_RS09020 | Not Available | Positive | 1720541 - 1721020 | 17699.4 |
| cytochrome c-type biogenesis heme lyase ccmf | DL545_RS09025 | Not Available | Positive | 1721017 - 1722960 | 71407.6 |
| thiol:disulfide interchange protein dsbe | DL545_RS09030 | Not Available | Positive | 1722957 - 1723514 | 20810.1 |
| cytochrome c-type biogenesis thiol:disulfide oxidoreductase ccmh | DL545_RS09035 | Not Available | Positive | 1723511 - 1724563 | 39091.3 |
| nitrate/nitrite response regulator protein narp | DL545_RS09040 | Not Available | Negative | 1724598 - 1725245 | 23636.5 |
| autotransporter outer membrane beta-barrel domain-containing protein | DL545_RS09050 | Not Available | Positive | 1725565 - 1727934 | 83470.1 |
| Trna-pro | Not Available | Not Available | Positive | 1728036 - 1728112 | Not Available |
| lps biosynthesis-modulating metalloenzyme yejm | DL545_RS09060 | Not Available | Negative | 1728187 - 1729947 | 67299.8 |
| yejl family protein | DL545_RS09065 | Not Available | Negative | 1729967 - 1730194 | 8288.95 |
| nucleoid-associated protein yejk | DL545_RS09070 | Not Available | Positive | 1730376 - 1731383 | 37824.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





