Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yfaq family protein | DL545_RS08860 | Not Available | Positive | 1686350 - 1687999 | 61461.1 |
| yfap family protein | DL545_RS08865 | Not Available | Positive | 1688004 - 1688780 | 28319.3 |
| acetyl-coa acetyltransferase | DL545_RS08870 | Not Available | Negative | 1688854 - 1690038 | 40352.0 |
| tigr00366 family protein | DL545_RS08875 | Not Available | Negative | 1690069 - 1691391 | 47530.6 |
| arylsulfatase | DL545_RS08880 | Not Available | Negative | 1691388 - 1692036 | 23007.1 |
| acetate coa-transferase subunit alpha | DL545_RS08885 | Not Available | Negative | 1692036 - 1692698 | 23527.7 |
| acetoacetate metabolism transcriptional regulator atoc | DL545_RS08890 | Not Available | Negative | 1692894 - 1694279 | 52073.4 |
| two-component system sensor histidine kinase atos | DL545_RS08895 | Not Available | Negative | 1694276 - 1696102 | 67794.1 |
| two-component system sensor histidine kinase rcsc | DL545_RS08900 | Not Available | Positive | 1696269 - 1699118 | 106529.0 |
| response regulator transcription factor rcsb | DL545_RS08905 | Not Available | Negative | 1699318 - 1699968 | 23672.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





