Escherichia coli strain UK_Dog_Liverpool

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain UK_Dog_Liverpool is a Gram-negative, rod-shaped bacterium that is facultatively anaerobic and exhibits mobility due to the presence of flagella. It typically resides in host-associated habitats and has an optimal growth temperature of 37°C, categorizing it as mesophilic. This strain has a complex genetic structure with four replicons and possesses two membranes. E. coli UK_Dog_Liverpool is notably associated with a wide range of hosts, including Homo sapiens, various mammals (such as Bos taurus and Canis lupus familiaris), and even certain plants like Solanum lycopersicum. This diverse host range indicates its adaptability and potential ecological impact. Health effects linked to this strain are significant and varied, as it is associated with numerous infections and conditions. These include urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as septicemia and hemolytic uremic syndrome (HUS). The breadth of diseases caused by this strain underscores its pathogenicity in humans and other animals. The diverse interactions of E. coli UK_Dog_Liverpool with multiple hosts suggest its role in the microbiome and its potential implications for both health and disease dynamics. Understanding the pathogenic mechanisms and ecological relationships of this strain can be crucial for managing infections and studying microbial ecology in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain UK_Dog_Liverpool

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain UK_Dog_Liverpool
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,

Gene Summary

Adenine Count

964 bp

Thymine Count

1013 bp

Guanine Count

1066 bp

Cytosine Count

1030 bp

Genome Length

4073 bp

Protein-coding Genes

2 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein yfaeDL545_RS08810Not AvailableNegative1667379 - 16676339293.29
class ia ribonucleoside-diphosphate reductase subunit betaDL545_RS08815Not AvailableNegative1667633 - 166876343519.6
class 1a ribonucleoside-diphosphate reductase subunit alphaDL545_RS08820Not AvailableNegative1668997 - 167128285780.0
protein ypabDL545_RS27705Not AvailablePositive1671410 - 16715535325.5
aida-i family autotransporter adhesin yfal/ehacDL545_RS08830Not AvailablePositive1671978 - 1675730131208.0
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubigDL545_RS08835Not AvailableNegative1675858 - 167658026572.0
dna topoisomerase (atp-hydrolyzing) subunit aDL545_RS08840Not AvailablePositive1676727 - 167935496994.4
duf2138 domain-containing proteinDL545_RS08845Not AvailablePositive1679503 - 168119162674.7
duf1175 domain-containing proteinDL545_RS08850Not AvailablePositive1681188 - 168181123768.5
alpha-2-macroglobulin family proteinDL545_RS08855Not AvailablePositive1681835 - 1686349166533.0

Displaying genes 1791 – 1800 of 4831 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total