Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 4 subunit hyfa | DL545_RS07625 | Not Available | Negative | 1430186 - 1430803 | 22153.6 |
| thioredoxin-dependent thiol peroxidase | DL545_RS07630 | Not Available | Negative | 1431056 - 1431526 | 17634.9 |
| glycine cleavage system transcriptional repressor | DL545_RS07635 | Not Available | Negative | 1431526 - 1432098 | 20769.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | DL545_RS07640 | Not Available | Positive | 1432244 - 1433122 | 31285.9 |
| outer membrane protein assembly factor bamc | DL545_RS07645 | Not Available | Positive | 1433139 - 1434173 | 36844.5 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | DL545_RS07650 | Not Available | Positive | 1434386 - 1435099 | 26996.5 |
| toxin-antitoxin system antitoxin vapb | DL545_RS07655 | Not Available | Positive | 1435253 - 1435480 | 8499.05 |
| type ii toxin-antitoxin system trna(fmet)-specific endonuclease vapc | DL545_RS07660 | Not Available | Positive | 1435480 - 1435878 | 14895.2 |
| neutral zinc metallopeptidase | DL545_RS07665 | Not Available | Positive | 1436025 - 1436888 | 31489.1 |
| trna cytosine(34) acetyltransferase tmca | DL545_RS07670 | Not Available | Positive | 1436903 - 1438918 | 74736.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





