Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator hyfr | DL545_RS07575 | Not Available | Negative | 1418301 - 1420313 | 75316.7 |
| hydrogenase 4 assembly chaperone hyfj | DL545_RS07580 | Not Available | Negative | 1420343 - 1420756 | 15578.8 |
| hydrogenase 4 catalytic subunit hyfi | DL545_RS07585 | Not Available | Negative | 1420749 - 1421507 | 28056.9 |
| hydrogenase 4 subunit h | DL545_RS07590 | Not Available | Negative | 1421504 - 1422049 | 20100.4 |
| hydrogenase 4 catalytic subunit hyfg | DL545_RS07595 | Not Available | Negative | 1422059 - 1423726 | 63400.1 |
| hydrogenase 4 subunit f | DL545_RS07600 | Not Available | Negative | 1423716 - 1425296 | 56536.4 |
| hydrogenase 4 membrane subunit | DL545_RS07605 | Not Available | Negative | 1425301 - 1425951 | 23348.9 |
| arylsulfatase | DL545_RS07610 | Not Available | Negative | 1425963 - 1427194 | 43633.7 |
| hydrogenase 4 subunit hyfc | DL545_RS07615 | Not Available | Negative | 1427211 - 1428158 | 34361.4 |
| arylsulfatase | DL545_RS07620 | Not Available | Negative | 1428169 - 1430186 | 73835.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





