Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phenylpropionate/cinnamic acid dioxygenase subunit beta | DL545_RS07310 | Not Available | Negative | 1361784 - 1362302 | 20580.3 |
| 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha | DL545_RS07315 | Not Available | Negative | 1362299 - 1363660 | 51111.8 |
| dna-binding transcriptional regulator hcar | DL545_RS07320 | Not Available | Positive | 1363796 - 1364686 | 32840.2 |
| 3-phenylpropionate mfs transporter | DL545_RS07325 | Not Available | Positive | 1364846 - 1365985 | 41595.1 |
| stationary phase inducible protein csie | DL545_RS07330 | Not Available | Negative | 1365977 - 1367257 | 49043.4 |
| alpha/beta hydrolase | DL545_RS07335 | Not Available | Negative | 1367448 - 1368302 | 31445.6 |
| inositol-1-monophosphatase | DL545_RS07340 | Not Available | Negative | 1368447 - 1369250 | 29173.8 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | DL545_RS07345 | Not Available | Positive | 1369369 - 1370106 | 26920.4 |
| fe-s cluster assembly transcriptional regulator iscr | DL545_RS07350 | Not Available | Positive | 1370407 - 1370895 | 17337.6 |
| cysteine desulfurase | DL545_RS07355 | Not Available | Positive | 1371007 - 1372221 | 45092.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





