Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5107 domain-containing protein | DL545_RS07260 | Not Available | Positive | 1349947 - 1353228 | 123938.0 |
| substrate-binding domain-containing protein | DL545_RS07265 | Not Available | Positive | 1353325 - 1354308 | 35034.2 |
| sugar abc transporter atp-binding protein | DL545_RS07270 | Not Available | Positive | 1354331 - 1355842 | 55063.8 |
| abc transporter permease | DL545_RS07275 | Not Available | Positive | 1355867 - 1356865 | 34441.6 |
| zinc-dependent alcohol dehydrogenase family protein | DL545_RS07280 | Not Available | Positive | 1356898 - 1357992 | 39354.7 |
| aldose 1-epimerase | DL545_RS07285 | Not Available | Positive | 1358004 - 1358876 | 32718.1 |
| doxx family protein | DL545_RS07290 | Not Available | Negative | 1358924 - 1359346 | 15212.3 |
| phenylpropionate dioxygenase ferredoxin reductase subunit | DL545_RS07295 | Not Available | Negative | 1359443 - 1360645 | 43966.8 |
| 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | DL545_RS07300 | Not Available | Negative | 1360655 - 1361467 | 28471.3 |
| bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | DL545_RS07305 | Not Available | Negative | 1361464 - 1361784 | 11329.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





