Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome maturation factor rimm | DL545_RS06930 | Not Available | Positive | 1286896 - 1287444 | 20606.6 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DL545_RS06935 | Not Available | Positive | 1287475 - 1288242 | 28424.0 |
| 50s ribosomal protein l19 | DL545_RS06940 | Not Available | Positive | 1288284 - 1288631 | 13134.0 |
| ompa family protein | DL545_RS06945 | Not Available | Negative | 1288707 - 1289189 | 17259.6 |
| diguanylate cyclase dgcn | DL545_RS06950 | Not Available | Negative | 1289205 - 1290431 | 45926.0 |
| yfir family protein | DL545_RS06955 | Not Available | Negative | 1290421 - 1290939 | 18979.2 |
| duf2799 domain-containing protein | DL545_RS06960 | Not Available | Negative | 1291089 - 1291454 | 13204.3 |
| 3-deoxy-7-phosphoheptulonate synthase arof | DL545_RS06965 | Not Available | Positive | 1291664 - 1292734 | 38820.3 |
| bifunctional chorismate mutase/prephenate dehydrogenase | DL545_RS06970 | Not Available | Positive | 1292745 - 1293866 | 42016.9 |
| bifunctional chorismate mutase/prephenate dehydratase | DL545_RS06975 | Not Available | Negative | 1293909 - 1295069 | 43129.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





