Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system toxin rata | DL545_RS06875 | Not Available | Positive | 1278201 - 1278638 | 16220.6 |
| rnfh family protein | DL545_RS06880 | Not Available | Positive | 1278628 - 1278918 | 10790.0 |
| outer membrane protein assembly factor bame | DL545_RS06885 | Not Available | Negative | 1278980 - 1279321 | 12302.8 |
| dna repair protein recn | DL545_RS06890 | Not Available | Negative | 1279470 - 1281131 | 61400.1 |
| nad(+) kinase | DL545_RS06895 | Not Available | Negative | 1281217 - 1282095 | 32568.3 |
| nucleotide exchange factor grpe | DL545_RS06905 | Not Available | Positive | 1282218 - 1282811 | 21813.1 |
| hlyc/corc family transporter | DL545_RS06910 | Not Available | Negative | 1282866 - 1284152 | 48047.2 |
| inner membrane protein ypjd | DL545_RS06915 | Not Available | Negative | 1284173 - 1284964 | 29263.9 |
| signal recognition particle protein | DL545_RS06920 | Not Available | Positive | 1285131 - 1286492 | 49790.5 |
| 30s ribosomal protein s16 | DL545_RS06925 | Not Available | Positive | 1286629 - 1286877 | 9191.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





