Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class 1b ribonucleoside-diphosphate reductase subunit alpha | DL545_RS06535 | Not Available | Negative | 1220199 - 1222343 | 80397.6 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | DL545_RS06540 | Not Available | Negative | 1222316 - 1222726 | 15341.3 |
| glutaredoxin-like protein nrdh | DL545_RS06545 | Not Available | Negative | 1222723 - 1222968 | 9139.98 |
| duf883 domain-containing protein | DL545_RS06550 | Not Available | Negative | 1223216 - 1223545 | 11847.9 |
| duf2002 family protein | DL545_RS06555 | Not Available | Positive | 1223697 - 1224041 | 13066.5 |
| l-alanine exporter alae | DL545_RS06560 | Not Available | Negative | 1224078 - 1224527 | 16950.0 |
| dna-binding protein stpa | DL545_RS06565 | Not Available | Positive | 1225195 - 1225599 | 15348.4 |
| thiosulfate sulfurtransferase ygap | DL545_RS06570 | Not Available | Negative | 1225646 - 1226170 | 18701.9 |
| arsr/smtb family transcription factor | DL545_RS06575 | Not Available | Negative | 1226180 - 1226479 | 10596.9 |
| yqae/pmp3 family membrane protein | DL545_RS06580 | Not Available | Positive | 1226662 - 1226820 | 5865.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





