Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase subunit 3 | DL545_RS06280 | Not Available | Positive | 1172526 - 1174352 | 64079.2 |
| formate hydrogenlyase subunit hycd | DL545_RS06285 | Not Available | Positive | 1174355 - 1175278 | 33065.4 |
| formate hydrogenlyase subunit hyce | DL545_RS06290 | Not Available | Positive | 1175296 - 1177005 | 64970.1 |
| formate hydrogenlyase subunit hycf | DL545_RS06295 | Not Available | Positive | 1177015 - 1177557 | 20330.4 |
| formate hydrogenlyase subunit hycg | DL545_RS06300 | Not Available | Positive | 1177557 - 1178324 | 27999.7 |
| formate hydrogenlyase assembly protein hych | DL545_RS06305 | Not Available | Positive | 1178321 - 1178731 | 15465.5 |
| hydrogenase maturation peptidase hyci | DL545_RS06310 | Not Available | Positive | 1178724 - 1179194 | 17057.6 |
| hypothetical protein | DL545_RS06315 | Not Available | Positive | 1179219 - 1179980 | 28453.2 |
| type ii toxin-antitoxin system higb family toxin | DL545_RS06320 | Not Available | Positive | 1180154 - 1180465 | 12426.8 |
| helix-turn-helix domain-containing protein | DL545_RS06325 | Not Available | Positive | 1180462 - 1180881 | 15417.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





