Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| terc family protein | DL545_RS05725 | Not Available | Negative | 1054756 - 1055469 | 26159.0 |
| dna mismatch repair endonuclease muth | DL545_RS05730 | Not Available | Negative | 1055538 - 1056227 | 25500.9 |
| protein ygdt | DL545_RS27700 | Not Available | Positive | 1056413 - 1056559 | 5231.2 |
| rna pyrophosphohydrolase | DL545_RS05735 | Not Available | Positive | 1056912 - 1057442 | 20796.0 |
| phosphoenolpyruvate--protein phosphotransferase | DL545_RS05740 | Not Available | Positive | 1057455 - 1059701 | 83734.8 |
| prolipoprotein diacylglyceryl transferase | DL545_RS05745 | Not Available | Positive | 1059852 - 1060727 | 33109.9 |
| thymidylate synthase | DL545_RS05750 | Not Available | Positive | 1060734 - 1061528 | 30481.4 |
| prepilin peptidase-dependent protein | DL545_RS05760 | Not Available | Positive | 1061713 - 1062183 | 17866.3 |
| prepilin peptidase-dependent protein | DL545_RS05765 | Not Available | Positive | 1062174 - 1062737 | 20509.6 |
| duf2509 family protein | DL545_RS05770 | Not Available | Positive | 1062734 - 1063141 | 14886.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





