Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system needle length determinant, span/eivj family | DL545_RS27455 | Not Available | Positive | 1020239 - 1020586 | 13732.5 |
| arylsulfatase | DL545_RS05515 | Not Available | Positive | 1020546 - 1021533 | 34555.1 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | DL545_RS05520 | Not Available | Positive | 1021523 - 1022188 | 24634.6 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | DL545_RS05525 | Not Available | Positive | 1022198 - 1022458 | 9429.87 |
| type iii secretion system export apparatus subunit sctt | DL545_RS05530 | Not Available | Positive | 1022460 - 1023227 | 28287.8 |
| arylsulfatase | DL545_RS27460 | Not Available | Positive | 1023236 - 1024362 | 42725.0 |
| hypothetical protein | DL545_RS05550 | Not Available | Negative | 1024424 - 1024717 | 11045.2 |
| helix-turn-helix transcriptional regulator | DL545_RS05555 | Not Available | Negative | 1024719 - 1025219 | 19143.0 |
| prgh/eprh family type iii secretion apparatus protein | DL545_RS05560 | Not Available | Positive | 1025477 - 1026658 | 45248.8 |
| arylsulfatase | DL545_RS05565 | Not Available | Positive | 1026672 - 1026912 | 8761.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





