Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| selenium cofactor biosynthesis protein yqec | DL545_RS05405 | Not Available | Positive | 998975 - 999745 | 28179.2 |
| selenium-dependent molybdenum cofactor biosynthesis protein yqeb | DL545_RS05410 | Not Available | Positive | 999793 - 1001418 | 57697.5 |
| carbamate kinase | DL545_RS05415 | Not Available | Negative | 1001459 - 1002391 | 33072.9 |
| d-phenylhydantoinase | DL545_RS05420 | Not Available | Negative | 1002439 - 1003824 | 51060.2 |
| ygey family selenium metabolism-linked hydrolase | DL545_RS05425 | Not Available | Negative | 1003877 - 1005088 | 44806.4 |
| diaminopropionate ammonia-lyase | DL545_RS05430 | Not Available | Negative | 1005146 - 1006342 | 43330.1 |
| knotted carbamoyltransferase ygew | DL545_RS05435 | Not Available | Negative | 1006400 - 1007587 | 44058.7 |
| sigma-54 interaction domain-containing protein | DL545_RS05440 | Not Available | Positive | 1008066 - 1009844 | 66087.0 |
| xanthine dehydrogenase iron sulfur-binding subunit xdhc | DL545_RS05445 | Not Available | Negative | 1009884 - 1010363 | 16922.7 |
| xanthine dehydrogenase fad-binding subunit xdhb | DL545_RS05450 | Not Available | Negative | 1010360 - 1011238 | 31586.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





