Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UK_Dog_Liverpool |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_04,
Gene Summary
Adenine Count
964 bp
Thymine Count
1013 bp
Guanine Count
1066 bp
Cytosine Count
1030 bp
Genome Length
4073 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2623 family protein yghw | DL545_RS04680 | Not Available | Positive | 860903 - 861190 | 10946.1 |
| hydrogenase 2 small subunit | DL545_RS04690 | Not Available | Positive | 861379 - 862497 | 39654.3 |
| hydrogenase 2 operon protein hyba | DL545_RS04695 | Not Available | Positive | 862500 - 863486 | 36005.0 |
| ni/fe-hydrogenase cytochrome b subunit | DL545_RS04700 | Not Available | Positive | 863476 - 864654 | 43604.6 |
| hydrogenase 2 large subunit | DL545_RS04705 | Not Available | Positive | 864651 - 866354 | 62494.6 |
| hyad/hybd family hydrogenase maturation endopeptidase | DL545_RS04710 | Not Available | Positive | 866354 - 866848 | 17724.8 |
| hydrogenase-2 assembly chaperone | DL545_RS04715 | Not Available | Positive | 866841 - 867329 | 17964.7 |
| hydrogenase maturation nickel metallochaperone hypa | DL545_RS04720 | Not Available | Positive | 867322 - 867663 | 12698.1 |
| hydrogenase maturation factor hybg | DL545_RS04725 | Not Available | Positive | 867676 - 867924 | 8808.67 |
| arylsulfatase | DL545_RS27680 | Not Available | Positive | 867937 - 868018 | 3160.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





