Escherichia coli strain UK_Dog_Liverpool

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain UK_Dog_Liverpool is a Gram-negative, rod-shaped bacterium that typically occurs in pairs or as single cells. This strain is classified as a facultative anaerobe, allowing it to thrive in environments with or without oxygen. Its optimal growth temperature is 37.0°C, which is consistent with the physiological temperature of many mammalian hosts, indicating its adaptation to a host-associated habitat. As a member of the genus Escherichia, this strain likely shares characteristics common to enteric bacteria, including its ability to ferment various carbohydrates and its role in the gut microbiome of mammals. The host-associated nature of E. coli strain UK_Dog_Liverpool suggests that it may play a role in the digestive processes or overall health of its canine host, although specific interactions or contributions to host metabolism remain to be established. The presence of this strain in dogs from Liverpool highlights the potential for geographic and host-specific variations within the E. coli species, reflecting the complex dynamics of host-microbe interactions. Further research could elucidate the ecological significance of this strain within the canine microbiome, contributing to our understanding of microbial diversity and its implications for pet health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain UK_Dog_Liverpool

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain UK_Dog_Liverpool
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli strain UK_Dog_Liverpool


Gene Summary

Adenine Count

964 bp

Thymine Count

1013 bp

Guanine Count

1066 bp

Cytosine Count

1030 bp

Genome Length

4073 bp

Protein-coding Genes

2 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
relaxase accessory protein mobcDL545_RS26775Not Available+1554 - 18089503.72
replication initiation proteinDL545_RS26785Not Available+2342 - 304327122.7
Is3 family transposaseDL545_RS06665Not Available+1247146 - 12473708196.78
AttlNot AvailableNot Available+1248327 - 1248338Not Available
parb/repb/spo0j family partition proteinDL545_RS06670Not Available-1248486 - 124938233868.4
Parb-like nuclease domain proteinDL545_RS06675Not Available-1249379 - 125027534064.5
Site-specific recombinaseDL545_RS06680Not Available-1250265 - 125182160385.6
AttrNot AvailableNot Available+1251998 - 1252009Not Available
Integrase-like proteinDL545_RS06685Not Available-1252104 - 125333346644.8
AttlNot AvailableNot Available+1253499 - 1253526Not Available

Displaying genes 1 – 10 of 4831 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites