Hydrocarboniclastica marina strain soil36-7

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Hydrocarboniclastica

Description

Hydrocarboniclastica marina strain soil36-7 is characterized by possessing two replicons, indicating a complex genetic makeup. The strain is cataloged under two specific accessions: NZ_CP031093.1 and NZ_CP031094.1. These accessions provide valuable genetic information that can be utilized for further research on this strain. As a member of the Hydrocarboniclastica genus, soil36-7 is likely associated with hydrocarbon degradation, which is an important ecological process. Organisms in this genus are known for their ability to metabolize hydrocarbons, contributing to bioremediation efforts in environments contaminated with petroleum products. The presence of two replicons may suggest a versatile metabolic capacity, enabling the strain to adapt to various environmental conditions and substrates. In conclusion, Hydrocarboniclastica marina strain soil36-7 stands out due to its dual replicon structure, which may enhance its adaptability and efficiency in hydrocarbon degradation. This adaptability not only highlights the strain's potential in bioremediation applications but also underscores the significance of studying microbial diversity and functionality in soil ecosystems. Understanding such traits can inform strategies for environmental management and pollution mitigation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusHydrocarboniclastica
SpeciesHydrocarboniclastica marina
Strainstrain soil36-7

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrocarboniclastica marina strain soil36-7


Gene Summary

Adenine Count

869010 bp

Thymine Count

866746 bp

Guanine Count

1202264 bp

Cytosine Count

1200040 bp

Genome Length

4138060 bp

Protein-coding Genes

3591 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix transcriptional regulatorsoil367_RS00005Not AvailablePositive1 - 1987544.14
duf927 domain-containing proteinsoil367_RS00010Not AvailablePositive212 - 188862871.6
helix-turn-helix transcriptional regulatorsoil367_RS00015Not AvailablePositive1949 - 229313216.1
site-specific integrasesoil367_RS00020Not AvailableNegative2339 - 352945762.3
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmesoil367_RS00025Not AvailableNegative3709 - 510649546.2
membrane protein insertase yidcsoil367_RS00030Not AvailableNegative5126 - 682963864.8
membrane protein insertion efficiency factor yiddsoil367_RS00035Not AvailableNegative6833 - 711710676.0
ribonuclease p protein componentsoil367_RS00040Not AvailableNegative7140 - 753214989.2
50s ribosomal protein l34soil367_RS00045Not AvailableNegative7546 - 76805082.47
chromosomal replication initiator protein dnaasoil367_RS00050Not AvailablePositive8494 - 997255906.9

Displaying genes 1 – 10 of 3760 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.