Hydrocarboniclastica marina strain soil36-7

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Hydrocarboniclastica

Description

Hydrocarboniclastica marina strain soil36-7 is characterized by possessing two replicons, indicating a complex genetic makeup. The strain is cataloged under two specific accessions: NZ_CP031093.1 and NZ_CP031094.1. These accessions provide valuable genetic information that can be utilized for further research on this strain. As a member of the Hydrocarboniclastica genus, soil36-7 is likely associated with hydrocarbon degradation, which is an important ecological process. Organisms in this genus are known for their ability to metabolize hydrocarbons, contributing to bioremediation efforts in environments contaminated with petroleum products. The presence of two replicons may suggest a versatile metabolic capacity, enabling the strain to adapt to various environmental conditions and substrates. In conclusion, Hydrocarboniclastica marina strain soil36-7 stands out due to its dual replicon structure, which may enhance its adaptability and efficiency in hydrocarbon degradation. This adaptability not only highlights the strain's potential in bioremediation applications but also underscores the significance of studying microbial diversity and functionality in soil ecosystems. Understanding such traits can inform strategies for environmental management and pollution mitigation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusHydrocarboniclastica
SpeciesHydrocarboniclastica marina
Strainstrain soil36-7

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrocarboniclastica marina strain soil36-7 chromosome, complete

Gene Summary

Adenine Count

869010 bp

Thymine Count

866746 bp

Guanine Count

1202264 bp

Cytosine Count

1200040 bp

Genome Length

4138060 bp

Protein-coding Genes

3591 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycerol-3-phosphate acyltransferasesoil367_RS02515Not AvailableNegative556262 - 55685821222.2
dihydroneopterin aldolasesoil367_RS02520Not AvailablePositive556938 - 55731213535.3
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinasesoil367_RS02525Not AvailablePositive557309 - 55780918531.2
glucose-6-phosphate isomerasesoil367_RS02530Not AvailableNegative557847 - 55952662313.1
pantoate--beta-alanine ligasesoil367_RS02535Not AvailableNegative559645 - 56049631159.3
3-methyl-2-oxobutanoate hydroxymethyltransferasesoil367_RS02540Not AvailableNegative560493 - 56128727808.6
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinasesoil367_RS02545Not AvailableNegative561485 - 56197617948.8
polynucleotide adenylyltransferase pcnbsoil367_RS02550Not AvailableNegative561973 - 56334051809.6
sigma-54-dependent transcriptional regulatorsoil367_RS02555Not AvailableNegative564067 - 56545851246.3
atp-binding proteinsoil367_RS02560Not AvailableNegative565474 - 568425106849.0

Displaying genes 501 – 510 of 3760 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.