Hydrocarboniclastica marina strain soil36-7

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Hydrocarboniclastica

Description

Hydrocarboniclastica marina strain soil36-7 is characterized by possessing two replicons, indicating a complex genetic makeup. The strain is cataloged under two specific accessions: NZ_CP031093.1 and NZ_CP031094.1. These accessions provide valuable genetic information that can be utilized for further research on this strain. As a member of the Hydrocarboniclastica genus, soil36-7 is likely associated with hydrocarbon degradation, which is an important ecological process. Organisms in this genus are known for their ability to metabolize hydrocarbons, contributing to bioremediation efforts in environments contaminated with petroleum products. The presence of two replicons may suggest a versatile metabolic capacity, enabling the strain to adapt to various environmental conditions and substrates. In conclusion, Hydrocarboniclastica marina strain soil36-7 stands out due to its dual replicon structure, which may enhance its adaptability and efficiency in hydrocarbon degradation. This adaptability not only highlights the strain's potential in bioremediation applications but also underscores the significance of studying microbial diversity and functionality in soil ecosystems. Understanding such traits can inform strategies for environmental management and pollution mitigation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusHydrocarboniclastica
SpeciesHydrocarboniclastica marina
Strainstrain soil36-7

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrocarboniclastica marina strain soil36-7 chromosome, complete

Gene Summary

Adenine Count

869010 bp

Thymine Count

866746 bp

Guanine Count

1202264 bp

Cytosine Count

1200040 bp

Genome Length

4138060 bp

Protein-coding Genes

3591 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
response regulator transcription factorsoil367_RS16875Not AvailableNegative3818181 - 381889426070.4
sensor histidine kinasesoil367_RS16880Not AvailableNegative3818986 - 382103775464.8
sdr family nad(p)-dependent oxidoreductasesoil367_RS16885Not AvailableNegative3821077 - 382185327133.8
acyl-coa dehydrogenase family proteinsoil367_RS16890Not AvailableNegative3821850 - 382303143272.7
histidine phosphatase family proteinsoil367_RS16895Not AvailableNegative3823087 - 382379726085.2
duf6285 domain-containing proteinsoil367_RS16900Not AvailableNegative3823797 - 382417713179.7
phosphotransferase family proteinsoil367_RS16905Not AvailableNegative3824174 - 382523539012.6
sigma 54-interacting transcriptional regulatorsoil367_RS16910Not AvailablePositive3825458 - 382742571915.6
long-chain fatty acid--coa ligasesoil367_RS16915Not AvailablePositive3827658 - 382928059673.1
dcap family trimeric outer membrane transportersoil367_RS16920Not AvailablePositive3829426 - 383055939944.2

Displaying genes 3381 – 3390 of 3760 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.