Hydrocarboniclastica marina strain soil36-7

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Hydrocarboniclastica

Description

Hydrocarboniclastica marina strain soil36-7 is characterized by possessing two replicons, indicating a complex genetic makeup. The strain is cataloged under two specific accessions: NZ_CP031093.1 and NZ_CP031094.1. These accessions provide valuable genetic information that can be utilized for further research on this strain. As a member of the Hydrocarboniclastica genus, soil36-7 is likely associated with hydrocarbon degradation, which is an important ecological process. Organisms in this genus are known for their ability to metabolize hydrocarbons, contributing to bioremediation efforts in environments contaminated with petroleum products. The presence of two replicons may suggest a versatile metabolic capacity, enabling the strain to adapt to various environmental conditions and substrates. In conclusion, Hydrocarboniclastica marina strain soil36-7 stands out due to its dual replicon structure, which may enhance its adaptability and efficiency in hydrocarbon degradation. This adaptability not only highlights the strain's potential in bioremediation applications but also underscores the significance of studying microbial diversity and functionality in soil ecosystems. Understanding such traits can inform strategies for environmental management and pollution mitigation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusHydrocarboniclastica
SpeciesHydrocarboniclastica marina
Strainstrain soil36-7

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrocarboniclastica marina strain soil36-7 chromosome, complete

Gene Summary

Adenine Count

869010 bp

Thymine Count

866746 bp

Guanine Count

1202264 bp

Cytosine Count

1200040 bp

Genome Length

4138060 bp

Protein-coding Genes

3591 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system atpase tsshsoil367_RS01510Not AvailablePositive327216 - 32981094980.9
hcp family type vi secretion system effectorsoil367_RS01515Not AvailablePositive329897 - 33037617492.7
type vi secretion system vgr family proteinsoil367_RS01520Not AvailablePositive330454 - 33227766829.6
hypothetical proteinsoil367_RS01525Not AvailablePositive332297 - 33265913663.0
hypothetical proteinsoil367_RS01530Not AvailablePositive332681 - 33359234046.5
hypothetical proteinsoil367_RS01535Not AvailablePositive333577 - 33438929218.7
hypothetical proteinsoil367_RS01540Not AvailablePositive334411 - 33527731668.5
rhs repeat-associated core domain-containing proteinsoil367_RS01545Not AvailablePositive335543 - 339583151306.0
abcb family abc transporter atp-binding protein/permeasesoil367_RS01550Not AvailableNegative340212 - 34200866485.5
crp/fnr family transcriptional regulatorsoil367_RS01555Not AvailablePositive342297 - 34304027583.5

Displaying genes 301 – 310 of 3760 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.