Hydrocarboniclastica marina strain soil36-7

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Hydrocarboniclastica

Description

Hydrocarboniclastica marina strain soil36-7 is characterized by possessing two replicons, indicating a complex genetic makeup. The strain is cataloged under two specific accessions: NZ_CP031093.1 and NZ_CP031094.1. These accessions provide valuable genetic information that can be utilized for further research on this strain. As a member of the Hydrocarboniclastica genus, soil36-7 is likely associated with hydrocarbon degradation, which is an important ecological process. Organisms in this genus are known for their ability to metabolize hydrocarbons, contributing to bioremediation efforts in environments contaminated with petroleum products. The presence of two replicons may suggest a versatile metabolic capacity, enabling the strain to adapt to various environmental conditions and substrates. In conclusion, Hydrocarboniclastica marina strain soil36-7 stands out due to its dual replicon structure, which may enhance its adaptability and efficiency in hydrocarbon degradation. This adaptability not only highlights the strain's potential in bioremediation applications but also underscores the significance of studying microbial diversity and functionality in soil ecosystems. Understanding such traits can inform strategies for environmental management and pollution mitigation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusHydrocarboniclastica
SpeciesHydrocarboniclastica marina
Strainstrain soil36-7

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrocarboniclastica marina strain soil36-7 chromosome, complete

Gene Summary

Adenine Count

869010 bp

Thymine Count

866746 bp

Guanine Count

1202264 bp

Cytosine Count

1200040 bp

Genome Length

4138060 bp

Protein-coding Genes

3591 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trk system potassium transporter trkasoil367_RS00105Not AvailableNegative22521 - 2389450473.9
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbsoil367_RS00110Not AvailableNegative23995 - 2534749367.3
methionyl-trna formyltransferasesoil367_RS00115Not AvailableNegative25344 - 2628833093.8
peptide deformylasesoil367_RS00120Not AvailableNegative26395 - 2689819252.4
lysm peptidoglycan-binding domain-containing proteinsoil367_RS00125Not AvailablePositive27414 - 2844237621.0
dna-processing protein dprasoil367_RS00130Not AvailablePositive28674 - 2988542742.2
l-threonylcarbamoyladenylate synthasesoil367_RS00135Not AvailablePositive29867 - 3043920778.2
oxygen-dependent coproporphyrinogen oxidasesoil367_RS00140Not AvailablePositive30557 - 3149535594.4
shikimate dehydrogenasesoil367_RS00145Not AvailablePositive31498 - 3231329028.4
motility protein asoil367_RS00150Not AvailablePositive32415 - 3318827783.5

Displaying genes 21 – 30 of 3760 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.