Runella rosea strain HYN0085

Gram-negativeBacilli

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Spirosomataceae

Genus

Runella

Description

Runella rosea strain HYN0085 is a Gram-negative bacterium characterized by its bacilli shape. This strain is notable for possessing three replicons, which may suggest a complex genetic architecture, potentially influencing its adaptability and metabolic capabilities. The strain is cataloged under several accessions, specifically NZ_CP030851.1, NZ_CP030852.1, and NZ_CP030855.1, which provide a basis for its genomic analysis and identification within microbial databases. The presence of multiple replicons in bacteria can be associated with various ecological functions, including the ability to acquire new traits through horizontal gene transfer. The ecological insight into Runella rosea strain HYN0085 may hinge on its Gram-negative nature and bacilli morphology, which often confer advantages in diverse environments. Gram-negative bacteria are typically more resistant to certain antibiotics and can thrive in various ecological niches, including soil and aquatic systems. Consequently, the unique traits of Runella rosea strain HYN0085 may play a role in nutrient cycling or interactions within microbial communities, although specific ecological functions require further investigation. Overall, this strain's genetic characteristics and morphology indicate a potential for significant ecological interactions in its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilySpirosomataceae
GenusRunella
SpeciesRunella rosea
Strainstrain HYN0085

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Runella rosea strain HYN0085 plasmid unnamed5, complete sequence.

Gene Summary

Adenine Count

12673 bp

Thymine Count

13322 bp

Guanine Count

10631 bp

Cytosine Count

10189 bp

Genome Length

46815 bp

Protein-coding Genes

28 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sgnh/gdsl hydrolase family proteinDR864_RS28670Not AvailableNegative2011 - 324646088.7
atp-binding proteinDR864_RS28675Not AvailablePositive3517 - 456940711.8
llm class flavin-dependent oxidoreductaseDR864_RS28680Not AvailablePositive4677 - 569937203.7
tyrosine-type recombinase/integraseDR864_RS28685Not AvailableNegative5785 - 675336755.1
yopx family proteinDR864_RS28690Not AvailableNegative6908 - 737818095.8
xre family transcriptional regulatorDR864_RS28695Not AvailablePositive7632 - 845330890.2
yitt family proteinDR864_RS28700Not AvailableNegative8529 - 950335209.8
hypothetical proteinDR864_RS28705Not AvailableNegative9584 - 1007518600.6
gmc oxidoreductaseDR864_RS28710Not AvailableNegative10912 - 1263063863.1
gluconate 2-dehydrogenase subunit 3 family proteinDR864_RS28715Not AvailableNegative12646 - 1325422909.7

Displaying genes 111 – 120 of 182 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.