Runella rosea strain HYN0085

Gram-negativeBacilli

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Spirosomataceae

Genus

Runella

Description

Runella rosea strain HYN0085 is a Gram-negative bacterium characterized by its bacilli shape. This strain is notable for possessing three replicons, which may suggest a complex genetic architecture, potentially influencing its adaptability and metabolic capabilities. The strain is cataloged under several accessions, specifically NZ_CP030851.1, NZ_CP030852.1, and NZ_CP030855.1, which provide a basis for its genomic analysis and identification within microbial databases. The presence of multiple replicons in bacteria can be associated with various ecological functions, including the ability to acquire new traits through horizontal gene transfer. The ecological insight into Runella rosea strain HYN0085 may hinge on its Gram-negative nature and bacilli morphology, which often confer advantages in diverse environments. Gram-negative bacteria are typically more resistant to certain antibiotics and can thrive in various ecological niches, including soil and aquatic systems. Consequently, the unique traits of Runella rosea strain HYN0085 may play a role in nutrient cycling or interactions within microbial communities, although specific ecological functions require further investigation. Overall, this strain's genetic characteristics and morphology indicate a potential for significant ecological interactions in its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilySpirosomataceae
GenusRunella
SpeciesRunella rosea
Strainstrain HYN0085

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Runella rosea strain HYN0085 plasmid unnamed2, complete sequence.

Gene Summary

Adenine Count

24539 bp

Thymine Count

26548 bp

Guanine Count

18453 bp

Cytosine Count

18393 bp

Genome Length

87933 bp

Protein-coding Genes

73 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pentapeptide repeat-containing proteinDR864_RS29355Not AvailableNegative1 - 128045673.5
cellulase family glycosylhydrolaseDR864_RS29360Not AvailableNegative1950 - 5876138148.0
crp/fnr family transcriptional regulatorDR864_RS29365Not AvailableNegative5980 - 667526710.6
integrase core domain-containing proteinDR864_RS30315Not AvailableNegative6814 - 70208004.64
hypothetical proteinDR864_RS30030Not AvailableNegative7881 - 80275472.67
abc transporter permeaseDR864_RS29375Not AvailablePositive8434 - 1085789863.4
recombinase family proteinDR864_RS29380Not AvailablePositive11114 - 1171622513.6
hypothetical proteinDR864_RS29385Not AvailablePositive12362 - 1349539587.5
3-coathanger stack domain-containing proteinDR864_RS29390Not AvailablePositive13573 - 1427724248.4
3-coathanger stack domain-containing proteinDR864_RS29395Not AvailablePositive14301 - 1604362191.2

Displaying genes 1 – 10 of 182 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.