Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system toxin ccdb | DNQ41_RS26900 | Not Available | Positive | 18500 - 18805 | 11693.2 |
| replication regulatory protein repa | DNQ41_RS27045 | Not Available | Positive | 35832 - 36089 | 9702.65 |
| repa leader peptide tap | DNQ41_RS27055 | Not Available | Positive | 36325 - 36399 | 2727.44 |
| duf4113 domain-containing protein | DNQ41_RS27060 | Not Available | Positive | 36392 - 36838 | 16535.1 |
| duf4113 domain-containing protein | DNQ41_RS27065 | Not Available | Negative | 36838 - 37452 | 20761.1 |
| arginine deiminase | DNQ41_RS27070 | Not Available | Positive | 38159 - 39379 | 45775.5 |
| carbamate kinase | DNQ41_RS27075 | Not Available | Positive | 39390 - 40301 | 32331.1 |
| ornithine carbamoyltransferase | DNQ41_RS27080 | Not Available | Positive | 40386 - 41390 | 37187.9 |
| yfcc family protein | DNQ41_RS27085 | Not Available | Positive | 41438 - 42841 | 49910.7 |
| arginine repressor | DNQ41_RS27090 | Not Available | Positive | 42922 - 43401 | 18197.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




