Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative basic amino acid antiporter yfcc | AM464_RS02830 | Not Available | Positive | 557461 - 558981 | 54872.1 |
| nudix hydrolase yfcd | AM464_RS02835 | Not Available | Negative | 559014 - 559556 | 20376.9 |
| phosphodiesterase | AM464_RS02840 | Not Available | Negative | 559614 - 560165 | 19992.1 |
| glutathione transferase | AM464_RS02845 | Not Available | Negative | 560221 - 560865 | 24327.0 |
| gsh-dependent disulfide bond oxidoreductase | AM464_RS02850 | Not Available | Positive | 561001 - 561648 | 24517.2 |
| dihydroneopterin triphosphate 2'-epimerase | AM464_RS02855 | Not Available | Positive | 561705 - 562067 | 14082.8 |
| tigr01777 family oxidoreductase | AM464_RS02860 | Not Available | Positive | 562088 - 562981 | 32700.7 |
| recombination-promoting nuclease rpnb | AM464_RS02865 | Not Available | Negative | 563029 - 563919 | 34181.5 |
| histidine abc transporter atp-binding protein hisp | AM464_RS02870 | Not Available | Negative | 564116 - 564889 | 28654.8 |
| abc transporter permease | AM464_RS02875 | Not Available | Negative | 564897 - 565613 | 26871.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




