Escherichia coli strain AR_0085

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain AR_0085 is a Gram-negative, rod-shaped bacterium that displays a facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. This strain is motile, possessing flagella, and typically arranges itself in singles or pairs. It is mesophilic, with an optimal growth temperature of 37°C, which aligns with the human body temperature, indicating its adaptation to host-associated habitats. E. coli AR_0085 is known to have a wide range of hosts, including Homo sapiens, various mammals (e.g., Bos taurus, Sus scrofa), avian species (e.g., Gallus gallus, Meleagris gallopavo), and even some plants (e.g., Solanum lycopersicum). This extensive host range underscores its ecological versatility and potential for transmission across different species. The strain is implicated in numerous health issues, particularly in humans, where it is associated with urinary tract infections (UTIs), gastrointestinal infections, and more severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). Its pathogenicity is evident in its ability to cause diverse clinical manifestations, including diarrhea, septicemia, and colibacillosis. The presence of two replicons and two membranes indicates a complex genetic structure typical of many E. coli strains. Given its pathogenic potential and ability to inhabit a broad range of hosts, E. coli strain AR_0085 highlights the importance of understanding microbial interactions within ecosystems and the potential health risks posed by zoonotic transmission.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain AR_0085

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain AR_0085
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain AR_0085 plasmid unnamed3, complete

Gene Summary

Adenine Count

29332 bp

Thymine Count

30020 bp

Guanine Count

27773 bp

Cytosine Count

30067 bp

Genome Length

117192 bp

Protein-coding Genes

141 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive150767 - 150785Not Available
Tail fiber proteinAM464_RS00810Not AvailableNegative151842 - 15241721359.1
Tail fiber proteinAM464_RS00815Not AvailableNegative152433 - 15416657753.4
Truncated transposaseAM464_RS00825Not AvailablePositive154300 - 15497725207.8
TransposaseAM464_RS00830Not AvailablePositive154977 - 15532413055.0
TransposaseAM464_RS00835Not AvailablePositive155344 - 15691558653.1
Hypothetical proteinAM464_RS00840Not AvailableNegative157216 - 15787825222.7
hypothetical proteinAM464_RS00845Not AvailableNegative157878 - 1581028062.67
Putative tail tip assembly proteinAM464_RS00855Not AvailableNegative158138 - 161854137366.0
Putative tail componentAM464_RS00860Not AvailableNegative161915 - 16256222615.5

Displaying genes 1 – 10 of 5327 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total