Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-3-deoxy-l-rhamnonate aldolase | AM464_RS02575 | Not Available | Negative | 502830 - 503633 | 28944.7 |
| mfs transporter | AM464_RS02580 | Not Available | Negative | 503651 - 504940 | 46257.4 |
| l-rhamnonate dehydratase | AM464_RS02585 | Not Available | Negative | 504997 - 506202 | 44229.0 |
| iclr family transcriptional regulator | AM464_RS02590 | Not Available | Negative | 506217 - 506999 | 28905.8 |
| nicotinamide mononucleotide deamidase-related protein yfay | AM464_RS02595 | Not Available | Negative | 507219 - 508421 | 44228.2 |
| yfaz family protein | AM464_RS02600 | Not Available | Negative | 508521 - 509063 | 18610.8 |
| nucleoside triphosphatase nudi | AM464_RS02605 | Not Available | Positive | 509342 - 509767 | 16371.6 |
| lipopolysaccharide core heptose(ii)-phosphate phosphatase ais | AM464_RS02610 | Not Available | Negative | 509806 - 510408 | 22257.8 |
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | AM464_RS02615 | Not Available | Positive | 510716 - 511855 | 41652.2 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | AM464_RS02620 | Not Available | Positive | 511859 - 512827 | 36341.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




