Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoid-associated protein yejk | AM464_RS02260 | Not Available | Negative | 428782 - 429789 | 37824.6 |
| yejl family protein | AM464_RS02265 | Not Available | Positive | 429971 - 430198 | 8288.95 |
| lps biosynthesis-modulating metalloenzyme yejm | AM464_RS02270 | Not Available | Positive | 430218 - 431978 | 67299.8 |
| Trna-pro | Not Available | Not Available | Positive | 432053 - 432129 | Not Available |
| autotransporter yejo | AM464_RS02285 | Not Available | Negative | 432232 - 434823 | 91233.3 |
| nitrate/nitrite response regulator protein narp | AM464_RS02295 | Not Available | Positive | 435143 - 435790 | 23636.5 |
| cytochrome c-type biogenesis thiol:disulfide oxidoreductase ccmh | AM464_RS02300 | Not Available | Negative | 436001 - 437053 | 39121.3 |
| thiol:disulfide interchange protein dsbe | AM464_RS02305 | Not Available | Negative | 437050 - 437607 | 20810.1 |
| cytochrome c-type biogenesis heme lyase ccmf | AM464_RS02310 | Not Available | Negative | 437604 - 439547 | 71393.6 |
| cytochrome c maturation protein ccme | AM464_RS02315 | Not Available | Negative | 439544 - 440023 | 17699.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




