Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is4-like element isvsa5 family transposase | AM464_RS02200 | Not Available | Positive | 418272 - 419480 | 46076.1 |
| duf1889 family protein | AM464_RS02205 | Not Available | Positive | 419496 - 420020 | 20313.3 |
| microcin c abc transporter permease yejb | AM464_RS02210 | Not Available | Positive | 420021 - 421115 | 40362.6 |
| abc transporter permease | AM464_RS02215 | Not Available | Positive | 421115 - 422140 | 38094.6 |
| microcin c abc transporter atp-binding protein yejf | AM464_RS02220 | Not Available | Positive | 422142 - 423731 | 58729.8 |
| yejg family protein | AM464_RS02225 | Not Available | Negative | 423735 - 424079 | 12525.9 |
| multidrug efflux mfs transporter bcr | AM464_RS02235 | Not Available | Negative | 424412 - 425602 | 43355.4 |
| 16s rrna pseudouridine(516) synthase rsua | AM464_RS02240 | Not Available | Negative | 425630 - 426325 | 25813.7 |
| dead/deah box helicase | AM464_RS02250 | Not Available | Positive | 426474 - 428234 | 66546.0 |
| 50s ribosomal protein l25 | AM464_RS02255 | Not Available | Positive | 428359 - 428643 | 10694.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




